Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
C9orf40Q8IXQ3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf40Q8IXQ3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.64■□□□□ 0.26
C9orf40Q8IXQ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf40Q8IXQ3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf40Q8IXQ3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 KRT18P56-201ENST00000507275 550 ntBASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C9orf40Q8IXQ3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 VENTXP7-201ENST00000475503 772 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AC005336.2-201ENST00000593183 939 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 Z69720.1-201ENST00000601483 472 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 FLJ13224-201ENST00000313737 1514 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 AC138028.4-201ENST00000564984 1845 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 KRT8P47-201ENST00000604727 1398 ntBASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf40Q8IXQ3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
C9orf40Q8IXQ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
C9orf40Q8IXQ3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms