Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 IER3-202ENST00000376377 1350 ntBASIC16.95■□□□□ 0.3
CCDC71Q8IV32 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 KRT18P38-201ENST00000449496 1282 ntBASIC16.95■□□□□ 0.3
CCDC71Q8IV32 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.95■□□□□ 0.3
CCDC71Q8IV32 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71Q8IV32 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AC009947.2-201ENST00000444014 672 ntBASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 AC112777.1-201ENST00000540175 1423 ntBASIC16.94■□□□□ 0.3
CCDC71Q8IV32 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71Q8IV32 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 PRSS44-201ENST00000515154 1146 ntBASIC16.93■□□□□ 0.3
CCDC71Q8IV32 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71Q8IV32 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms