Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LDB1Q86U70 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 LINC00602-201ENST00000629776 2065 ntBASIC18.05■□□□□ 0.48
LDB1Q86U70 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LDB1Q86U70 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LDB1Q86U70 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LDB1Q86U70 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LDB1Q86U70 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 AK4P3-201ENST00000418260 669 ntBASIC18.04■□□□□ 0.48
LDB1Q86U70 TSPY5P-201ENST00000426936 936 ntBASIC18.04■□□□□ 0.48
LDB1Q86U70 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 AL359075.1-203ENST00000462729 1002 ntBASIC18.04■□□□□ 0.48
LDB1Q86U70 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LDB1Q86U70 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.04■□□□□ 0.48
LDB1Q86U70 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.04■□□□□ 0.48
LDB1Q86U70 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 AL136038.4-201ENST00000603606 1261 ntBASIC18.04■□□□□ 0.48
LDB1Q86U70 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.04■□□□□ 0.48
LDB1Q86U70 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.04■□□□□ 0.48
LDB1Q86U70 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 LETM1P2-201ENST00000597330 2178 ntBASIC18.04■□□□□ 0.48
LDB1Q86U70 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LDB1Q86U70 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LDB1Q86U70 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.04■□□□□ 0.48
LDB1Q86U70 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.03■□□□□ 0.48
LDB1Q86U70 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 AC100803.2-201ENST00000562459 1963 ntBASIC18.03■□□□□ 0.48
LDB1Q86U70 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.03■□□□□ 0.48
LDB1Q86U70 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 STARP1-201ENST00000397973 869 ntBASIC18.03■□□□□ 0.48
LDB1Q86U70 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.03■□□□□ 0.48
LDB1Q86U70 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
LDB1Q86U70 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.03■□□□□ 0.48
LDB1Q86U70 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.03■□□□□ 0.48
LDB1Q86U70 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
LDB1Q86U70 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.03■□□□□ 0.48
LDB1Q86U70 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LDB1Q86U70 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LDB1Q86U70 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.03■□□□□ 0.48
LDB1Q86U70 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.03■□□□□ 0.48
LDB1Q86U70 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LDB1Q86U70 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LDB1Q86U70 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LDB1Q86U70 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.02■□□□□ 0.48
LDB1Q86U70 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.02■□□□□ 0.48
LDB1Q86U70 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LDB1Q86U70 RNF152P1-201ENST00000397754 604 ntBASIC18.02■□□□□ 0.48
LDB1Q86U70 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.02■□□□□ 0.48
LDB1Q86U70 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LDB1Q86U70 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LDB1Q86U70 LINC00167-201ENST00000530583 1419 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms