Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSMD2Q7Z408 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 ADH5P3-201ENST00000433842 1137 ntBASIC15.13■□□□□ 0.01
CSMD2Q7Z408 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 AC105339.1-204ENST00000636249 355 ntBASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 FEM1AP3-201ENST00000403722 1741 ntBASIC15.13■□□□□ 0.01
CSMD2Q7Z408 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.13■□□□□ 0.01
CSMD2Q7Z408 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 BX005266.1-201ENST00000473402 457 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 DUX4L27-201ENST00000554796 1261 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 MIR6752-201ENST00000618442 71 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 AC093484.2-201ENST00000580996 2166 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 AC010507.1-201ENST00000633895 436 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 AC010460.3-201ENST00000511359 1579 ntBASIC15.12■□□□□ 0.01
CSMD2Q7Z408 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSMD2Q7Z408 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.11■□□□□ 0.01
CSMD2Q7Z408 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms