Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 MED15P5-201ENST00000423150 992 ntBASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 AC021087.4-201ENST00000563761 564 ntBASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 HLA-J-201ENST00000462773 1622 ntBASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC149Q6ZUS6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 PGAM5P1-201ENST00000518923 814 ntBASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 IGHV3-22-201ENST00000520721 359 ntBASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 FAM197Y3-203ENST00000618346 717 ntBASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC149Q6ZUS6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 AC140113.2-201ENST00000604370 208 ntBASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC149Q6ZUS6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC149Q6ZUS6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.89■□□□□ 0.62
CCDC149Q6ZUS6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 RPS2P1-201ENST00000434010 821 ntBASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 AL591424.1-201ENST00000442569 1213 ntBASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 SART3-203ENST00000546611 1184 ntBASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC149Q6ZUS6 AL356488.2-201ENST00000602755 427 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms