Protein–RNA interactions for Protein: Q6P3X3

TTC27, Tetratricopeptide repeat protein 27, humanhuman

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC27Q6P3X3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 INGX-201ENST00000359239 846 ntBASIC18.65■□□□□ 0.58
TTC27Q6P3X3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 BX088651.1-201ENST00000540551 451 ntBASIC18.65■□□□□ 0.58
TTC27Q6P3X3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 CROCCP2-202ENST00000412962 2773 ntBASIC18.65■□□□□ 0.58
TTC27Q6P3X3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 AC133963.1-201ENST00000504166 1679 ntBASIC18.65■□□□□ 0.58
TTC27Q6P3X3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC27Q6P3X3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC27Q6P3X3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.64■□□□□ 0.58
TTC27Q6P3X3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 UNC93B2-201ENST00000285383 730 ntBASIC18.64■□□□□ 0.57
TTC27Q6P3X3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 SEC1P-202ENST00000473944 940 ntBASIC18.64■□□□□ 0.57
TTC27Q6P3X3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 FITM1-202ENST00000559294 800 ntBASIC18.64■□□□□ 0.57
TTC27Q6P3X3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 LINC00167-201ENST00000530583 1419 ntBASIC18.64■□□□□ 0.57
TTC27Q6P3X3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC27Q6P3X3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.63■□□□□ 0.57
TTC27Q6P3X3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 CCR12P-201ENST00000446203 998 ntBASIC18.63■□□□□ 0.57
TTC27Q6P3X3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 AC084018.2-201ENST00000613093 2607 ntBASIC18.63■□□□□ 0.57
TTC27Q6P3X3 AL138688.1-201ENST00000624851 1594 ntBASIC18.63■□□□□ 0.57
TTC27Q6P3X3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TTC27Q6P3X3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms