Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FZD10-202ENST00000539839 3282 ntBASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FDX1P1-201ENST00000449115 551 ntBASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 AC104692.2-201ENST00000603054 253 ntBASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
H3F3CQ6NXT2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 AC073592.3-201ENST00000625118 1834 ntBASIC16.66■□□□□ 0.26
H3F3CQ6NXT2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 AL160237.2-201ENST00000556165 472 ntBASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3F3CQ6NXT2 MIR5100-201ENST00000579544 119 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms