Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SEC1P-202ENST00000473944 940 ntBASIC16.85■□□□□ 0.29
REEP3Q6NUK4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 AL355075.4-201ENST00000554988 638 ntBASIC16.85■□□□□ 0.29
REEP3Q6NUK4 AC008687.5-201ENST00000593746 558 ntBASIC16.85■□□□□ 0.29
REEP3Q6NUK4 AP006294.2-201ENST00000641667 209 ntBASIC16.85■□□□□ 0.29
REEP3Q6NUK4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 PKD1P1-201ENST00000458669 6805 ntBASIC16.85■□□□□ 0.29
REEP3Q6NUK4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
REEP3Q6NUK4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 SNORA78-201ENST00000459373 127 ntBASIC16.84■□□□□ 0.29
REEP3Q6NUK4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 AL512604.3-201ENST00000569583 964 ntBASIC16.84■□□□□ 0.29
REEP3Q6NUK4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.84■□□□□ 0.29
REEP3Q6NUK4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
REEP3Q6NUK4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
REEP3Q6NUK4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
REEP3Q6NUK4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
REEP3Q6NUK4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 AC024243.1-201ENST00000609234 778 ntBASIC16.83■□□□□ 0.28
REEP3Q6NUK4 AC132938.6-201ENST00000623828 1655 ntBASIC16.83■□□□□ 0.28
REEP3Q6NUK4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
REEP3Q6NUK4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
REEP3Q6NUK4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms