Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 AC009154.2-201ENST00000621177 724 ntBASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 HTR7P1-202ENST00000624664 4411 ntBASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 AL121672.3-201ENST00000608644 468 ntBASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP4R3AQ6IN85 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AC016734.2-201ENST00000624325 1377 ntBASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 TSPY12P-201ENST00000421279 868 ntBASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PPP4R3AQ6IN85 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms