Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTL6Q6ICC9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 MIR149-201ENST00000384879 89 ntBASIC16.3■□□□□ 0.2
RTL6Q6ICC9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 AC079781.3-201ENST00000449110 356 ntBASIC16.3■□□□□ 0.2
RTL6Q6ICC9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
RTL6Q6ICC9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTL6Q6ICC9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 AC135050.7-201ENST00000624508 2218 ntBASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 AC099343.3-201ENST00000605834 2503 ntBASIC16.29■□□□□ 0.2
RTL6Q6ICC9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 NSUN5P1-202ENST00000421140 1535 ntBASIC16.29■□□□□ 0.2
RTL6Q6ICC9 NSUN5P2-203ENST00000457352 1529 ntBASIC16.29■□□□□ 0.2
RTL6Q6ICC9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTL6Q6ICC9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms