Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 AC007541.1-201ENST00000570282 1469 ntBASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 AD001527.2-201ENST00000622994 785 ntBASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 MIR663B-201ENST00000408361 115 ntBASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 SPDYE14P-201ENST00000442619 822 ntBASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 AL805961.1-202ENST00000641562 540 ntBASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 AC022144.1-201ENST00000602255 1580 ntBASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL13A1Q5TAT6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 NCF1C-201ENST00000438382 1427 ntBASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AC002056.1-201ENST00000395613 760 ntBASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AP005482.1-201ENST00000563722 1273 ntBASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 AC019129.2-201ENST00000609837 1235 ntBASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 KRT8P32-201ENST00000512863 1461 ntBASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL13A1Q5TAT6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 MIR1908-201ENST00000410394 80 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AP006294.1-201ENST00000415407 339 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 TSSK5P-201ENST00000423978 907 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 CXCL1P1-201ENST00000502804 216 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC243562.1-201ENST00000560672 389 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC099522.2-201ENST00000607001 744 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC026740.1-201ENST00000607068 791 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AC133552.6-201ENST00000613406 534 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AL590560.3-201ENST00000623350 461 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 AL139099.5-201ENST00000635274 300 ntBASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL13A1Q5TAT6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms