Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 AC005336.2-201ENST00000593183 939 ntBASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TTC39AQ5SRH9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 REXO1L9P-201ENST00000604264 2108 ntBASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 AL732292.2-201ENST00000609649 430 ntBASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TTC39AQ5SRH9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 AL121772.3-201ENST00000610840 674 ntBASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms