Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.5■□□□□ 0.23
RBM48Q5RL73 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RBM48Q5RL73 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.5■□□□□ 0.23
RBM48Q5RL73 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.5■□□□□ 0.23
RBM48Q5RL73 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBM48Q5RL73 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 AC105036.2-201ENST00000569468 176 ntBASIC16.49■□□□□ 0.23
RBM48Q5RL73 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
RBM48Q5RL73 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBM48Q5RL73 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RBM48Q5RL73 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
RBM48Q5RL73 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 FLJ38576-201ENST00000623820 2459 ntBASIC16.47■□□□□ 0.23
RBM48Q5RL73 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 AF201337.1-201ENST00000520239 748 ntBASIC16.47■□□□□ 0.23
RBM48Q5RL73 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms