Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AL355001.2-201ENST00000620617 1191 ntBASIC9.11□□□□□ -0.95
LINC01554Q52M75 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AC073869.1-201ENST00000415574 2762 ntBASIC9.11□□□□□ -0.95
LINC01554Q52M75 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 RASA4CP-201ENST00000424092 1398 ntBASIC9.11□□□□□ -0.95
LINC01554Q52M75 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC9.1□□□□□ -0.95
LINC01554Q52M75 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 AP001330.3-201ENST00000520123 633 ntBASIC9.1□□□□□ -0.95
LINC01554Q52M75 AC012414.1-201ENST00000556676 535 ntBASIC9.1□□□□□ -0.95
LINC01554Q52M75 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01554Q52M75 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01554Q52M75 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01554Q52M75 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
LINC01554Q52M75 AC015656.1-201ENST00000624209 3578 ntBASIC9.09□□□□□ -0.95
LINC01554Q52M75 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01554Q52M75 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01554Q52M75 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms