Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 AL031284.1-201ENST00000419297 478 ntBASIC21.56■■□□□ 1.04
PDS5AQ29RF7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 BX640515.1-201ENST00000617215 977 ntBASIC21.56■■□□□ 1.04
PDS5AQ29RF7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 AD001527.2-201ENST00000622994 785 ntBASIC21.56■■□□□ 1.04
PDS5AQ29RF7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 RNF165-205ENST00000588679 2904 ntBASIC21.56■■□□□ 1.04
PDS5AQ29RF7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDS5AQ29RF7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC073648.2-201ENST00000510116 352 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC148477.8-201ENST00000624298 468 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC135776.1-201ENST00000319817 2481 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 PMPCAP1-201ENST00000508114 1576 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AP000347.1-202ENST00000435868 847 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 RNPS1P1-201ENST00000507437 918 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 SART3-203ENST00000546611 1184 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.55■■□□□ 1.04
PDS5AQ29RF7 MIR7706-201ENST00000613747 67 ntBASIC21.55■■□□□ 1.04
PDS5AQ29RF7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.54■■□□□ 1.04
PDS5AQ29RF7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 AL356309.3-201ENST00000624132 1934 ntBASIC21.54■■□□□ 1.04
PDS5AQ29RF7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDS5AQ29RF7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms