Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA1EQ15878 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 CNN2P11-201ENST00000429351 262 ntBASIC17.5■□□□□ 0.39
CACNA1EQ15878 ALG1L5P-201ENST00000482043 771 ntBASIC17.5■□□□□ 0.39
CACNA1EQ15878 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 KRT18P2-201ENST00000447938 1258 ntBASIC17.5■□□□□ 0.39
CACNA1EQ15878 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA1EQ15878 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA1EQ15878 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 HCG4B-203ENST00000450128 991 ntBASIC17.49■□□□□ 0.39
CACNA1EQ15878 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 AL022326.1-202ENST00000641533 845 ntBASIC17.49■□□□□ 0.39
CACNA1EQ15878 KRT18P28-201ENST00000453838 1332 ntBASIC17.49■□□□□ 0.39
CACNA1EQ15878 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA1EQ15878 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CACNA1EQ15878 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AP000867.4-201ENST00000641616 219 ntBASIC17.48■□□□□ 0.39
CACNA1EQ15878 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 FAM8A3P-201ENST00000427218 844 ntBASIC17.48■□□□□ 0.39
CACNA1EQ15878 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.48■□□□□ 0.39
CACNA1EQ15878 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA1EQ15878 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 NCF1C-201ENST00000438382 1427 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms