Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH1Q08174 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDH1Q08174 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDH1Q08174 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDH1Q08174 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH1Q08174 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDH1Q08174 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 PCDHB18P-201ENST00000524813 2368 ntBASIC17.43■□□□□ 0.38
PCDH1Q08174 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 RNF152P1-201ENST00000397754 604 ntBASIC17.43■□□□□ 0.38
PCDH1Q08174 SPDYE15P-201ENST00000424157 909 ntBASIC17.43■□□□□ 0.38
PCDH1Q08174 TSPY5P-201ENST00000426936 936 ntBASIC17.43■□□□□ 0.38
PCDH1Q08174 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDH1Q08174 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDH1Q08174 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 GNAS-203ENST00000306120 1878 ntBASIC17.43■□□□□ 0.38
PCDH1Q08174 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH1Q08174 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDH1Q08174 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH1Q08174 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH1Q08174 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH1Q08174 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH1Q08174 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH1Q08174 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDH1Q08174 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PCDH1Q08174 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH1Q08174 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC022898.2-201ENST00000616822 1312 ntBASIC17.42■□□□□ 0.38
PCDH1Q08174 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH1Q08174 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDH1Q08174 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH1Q08174 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 AL133373.2-201ENST00000623187 2828 ntBASIC17.41■□□□□ 0.38
PCDH1Q08174 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH1Q08174 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDH1Q08174 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDH1Q08174 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
PCDH1Q08174 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDH1Q08174 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms