Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.24□□□□□ -0.13
CCL20P78556 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 HLA-A-209ENST00000638375 975 ntBASIC14.24□□□□□ -0.13
CCL20P78556 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.24□□□□□ -0.13
CCL20P78556 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL20P78556 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 KRT18P11-201ENST00000435214 1283 ntBASIC14.23□□□□□ -0.13
CCL20P78556 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL20P78556 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL20P78556 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL20P78556 RAP2CP1-201ENST00000605103 478 ntBASIC14.23□□□□□ -0.13
CCL20P78556 AL121832.2-201ENST00000610979 668 ntBASIC14.23□□□□□ -0.13
CCL20P78556 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.23□□□□□ -0.13
CCL20P78556 AC011767.1-201ENST00000617410 1153 ntBASIC14.23□□□□□ -0.13
CCL20P78556 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 RCC2P3-201ENST00000418112 1537 ntBASIC14.23□□□□□ -0.13
CCL20P78556 AC026691.1-201ENST00000602502 2017 ntBASIC14.23□□□□□ -0.13
CCL20P78556 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL20P78556 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL20P78556 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CCL20P78556 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL20P78556 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCL20P78556 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL20P78556 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL20P78556 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL20P78556 POU5F1P3-201ENST00000428824 1078 ntBASIC14.22□□□□□ -0.13
CCL20P78556 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CCL20P78556 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms