Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
SRPXP78539 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 SDHAP2-201ENST00000455183 2001 ntBASIC14.9□□□□□ -0.02
SRPXP78539 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SRPXP78539 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.9□□□□□ -0.02
SRPXP78539 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.9□□□□□ -0.02
SRPXP78539 KSR1P1-201ENST00000446298 240 ntBASIC14.9□□□□□ -0.02
SRPXP78539 FAM207BP-201ENST00000447172 505 ntBASIC14.9□□□□□ -0.02
SRPXP78539 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.9□□□□□ -0.02
SRPXP78539 AP002982.1-201ENST00000492365 877 ntBASIC14.9□□□□□ -0.02
SRPXP78539 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.9□□□□□ -0.02
SRPXP78539 UNC93B5-201ENST00000530315 699 ntBASIC14.9□□□□□ -0.02
SRPXP78539 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.9□□□□□ -0.02
SRPXP78539 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.9□□□□□ -0.02
SRPXP78539 AL353708.3-201ENST00000610272 989 ntBASIC14.9□□□□□ -0.02
SRPXP78539 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.9□□□□□ -0.02
SRPXP78539 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRPXP78539 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRPXP78539 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRPXP78539 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.89□□□□□ -0.03
SRPXP78539 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SRPXP78539 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.89□□□□□ -0.03
SRPXP78539 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 AL023284.2-201ENST00000405850 579 ntBASIC14.89□□□□□ -0.03
SRPXP78539 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 AC069544.1-201ENST00000609399 999 ntBASIC14.89□□□□□ -0.03
SRPXP78539 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.89□□□□□ -0.03
SRPXP78539 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRPXP78539 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
SRPXP78539 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.89□□□□□ -0.03
SRPXP78539 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRPXP78539 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRPXP78539 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRPXP78539 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRPXP78539 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms