Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.84■□□□□ 0.13
SEC61A1P61619 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.84■□□□□ 0.13
SEC61A1P61619 LIN28AP1-201ENST00000429574 405 ntBASIC15.84■□□□□ 0.13
SEC61A1P61619 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.84■□□□□ 0.13
SEC61A1P61619 PRSS44-201ENST00000515154 1146 ntBASIC15.84■□□□□ 0.13
SEC61A1P61619 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.84■□□□□ 0.13
SEC61A1P61619 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.84■□□□□ 0.13
SEC61A1P61619 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.84■□□□□ 0.13
SEC61A1P61619 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.84■□□□□ 0.13
SEC61A1P61619 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SEC61A1P61619 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.84■□□□□ 0.13
SEC61A1P61619 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.84■□□□□ 0.13
SEC61A1P61619 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SEC61A1P61619 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SEC61A1P61619 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
SEC61A1P61619 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SEC61A1P61619 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.83■□□□□ 0.13
SEC61A1P61619 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.83■□□□□ 0.13
SEC61A1P61619 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61A1P61619 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.83■□□□□ 0.12
SEC61A1P61619 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 TSPY21P-201ENST00000433481 731 ntBASIC15.83■□□□□ 0.12
SEC61A1P61619 ATP5G1P1-201ENST00000448724 379 ntBASIC15.83■□□□□ 0.12
SEC61A1P61619 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SEC61A1P61619 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.83■□□□□ 0.12
SEC61A1P61619 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.83■□□□□ 0.12
SEC61A1P61619 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SEC61A1P61619 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SEC61A1P61619 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SEC61A1P61619 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.83■□□□□ 0.12
SEC61A1P61619 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.83■□□□□ 0.12
SEC61A1P61619 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEC61A1P61619 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEC61A1P61619 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 AL645608.8-201ENST00000606034 2086 ntBASIC15.82■□□□□ 0.12
SEC61A1P61619 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SEC61A1P61619 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SEC61A1P61619 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.82■□□□□ 0.12
SEC61A1P61619 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 HMGA1P5-201ENST00000412453 271 ntBASIC15.82■□□□□ 0.12
SEC61A1P61619 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEC61A1P61619 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.82■□□□□ 0.12
SEC61A1P61619 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms