Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP54P61011 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.79■□□□□ 0.44
SRP54P61011 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.79■□□□□ 0.44
SRP54P61011 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 AC126763.1-201ENST00000552015 2118 ntBASIC17.79■□□□□ 0.44
SRP54P61011 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRP54P61011 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP54P61011 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.79■□□□□ 0.44
SRP54P61011 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.79■□□□□ 0.44
SRP54P61011 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRP54P61011 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.79■□□□□ 0.44
SRP54P61011 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRP54P61011 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 CROCCP3-202ENST00000420820 1947 ntBASIC17.78■□□□□ 0.44
SRP54P61011 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SRP54P61011 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SRP54P61011 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SRP54P61011 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.78■□□□□ 0.44
SRP54P61011 MTCL1P1-201ENST00000446207 792 ntBASIC17.78■□□□□ 0.44
SRP54P61011 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.78■□□□□ 0.44
SRP54P61011 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 BNIP3P18-201ENST00000593976 575 ntBASIC17.78■□□□□ 0.44
SRP54P61011 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SRP54P61011 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SRP54P61011 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.78■□□□□ 0.44
SRP54P61011 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.78■□□□□ 0.44
SRP54P61011 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.78■□□□□ 0.44
SRP54P61011 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRP54P61011 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
SRP54P61011 BX323043.1-201ENST00000641006 1765 ntBASIC17.77■□□□□ 0.44
SRP54P61011 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.77■□□□□ 0.44
SRP54P61011 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SRP54P61011 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 KRT18P65-201ENST00000439811 1286 ntBASIC17.77■□□□□ 0.44
SRP54P61011 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.77■□□□□ 0.44
SRP54P61011 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.77■□□□□ 0.44
SRP54P61011 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 AL031008.1-201ENST00000619963 541 ntBASIC17.77■□□□□ 0.44
SRP54P61011 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.77■□□□□ 0.44
SRP54P61011 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRP54P61011 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRP54P61011 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.77■□□□□ 0.43
SRP54P61011 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRP54P61011 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP54P61011 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRP54P61011 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRP54P61011 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.76■□□□□ 0.43
SRP54P61011 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms