Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.76■□□□□ 0.75
NCKAP1LP55160 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKAP1LP55160 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKAP1LP55160 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.76■□□□□ 0.75
NCKAP1LP55160 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKAP1LP55160 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKAP1LP55160 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKAP1LP55160 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 NOC2LP1-202ENST00000452600 2235 ntBASIC19.75■□□□□ 0.75
NCKAP1LP55160 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.75■□□□□ 0.75
NCKAP1LP55160 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKAP1LP55160 AC100803.2-201ENST00000562459 1963 ntBASIC19.75■□□□□ 0.75
NCKAP1LP55160 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKAP1LP55160 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.75■□□□□ 0.75
NCKAP1LP55160 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 AC233702.3-201ENST00000578656 1387 ntBASIC19.74■□□□□ 0.75
NCKAP1LP55160 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 TOB2P1-201ENST00000469761 992 ntBASIC19.74■□□□□ 0.75
NCKAP1LP55160 AC091607.1-201ENST00000490318 1060 ntBASIC19.74■□□□□ 0.75
NCKAP1LP55160 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 AP005901.3-202ENST00000581653 237 ntBASIC19.74■□□□□ 0.75
NCKAP1LP55160 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 KRT18P55-202ENST00000578578 1546 ntBASIC19.74■□□□□ 0.75
NCKAP1LP55160 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKAP1LP55160 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NCKAP1LP55160 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.73■□□□□ 0.75
NCKAP1LP55160 AC011840.4-201ENST00000578471 627 ntBASIC19.73■□□□□ 0.75
NCKAP1LP55160 AC005336.2-201ENST00000593183 939 ntBASIC19.73■□□□□ 0.75
NCKAP1LP55160 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKAP1LP55160 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms