Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H2P55055 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.16■□□□□ 0.34
NR1H2P55055 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.16■□□□□ 0.34
NR1H2P55055 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.16■□□□□ 0.34
NR1H2P55055 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.16■□□□□ 0.34
NR1H2P55055 AC133561.5-201ENST00000635547 218 ntBASIC17.16■□□□□ 0.34
NR1H2P55055 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.16■□□□□ 0.34
NR1H2P55055 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 FLJ13224-201ENST00000313737 1514 ntBASIC17.16■□□□□ 0.34
NR1H2P55055 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
NR1H2P55055 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NR1H2P55055 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 AC087499.1-201ENST00000418141 1075 ntBASIC17.15■□□□□ 0.34
NR1H2P55055 FAM197Y1-201ENST00000421178 764 ntBASIC17.15■□□□□ 0.34
NR1H2P55055 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NR1H2P55055 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.15■□□□□ 0.34
NR1H2P55055 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
NR1H2P55055 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NR1H2P55055 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H2P55055 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.15■□□□□ 0.34
NR1H2P55055 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.14■□□□□ 0.33
NR1H2P55055 LINC00602-201ENST00000629776 2065 ntBASIC17.14■□□□□ 0.33
NR1H2P55055 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.14■□□□□ 0.33
NR1H2P55055 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.14■□□□□ 0.33
NR1H2P55055 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
NR1H2P55055 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.14■□□□□ 0.33
NR1H2P55055 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NR1H2P55055 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.14■□□□□ 0.33
NR1H2P55055 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.14■□□□□ 0.33
NR1H2P55055 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NR1H2P55055 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NR1H2P55055 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.14■□□□□ 0.33
NR1H2P55055 REXO1L9P-201ENST00000604264 2108 ntBASIC17.14■□□□□ 0.33
NR1H2P55055 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NR1H2P55055 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
NR1H2P55055 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.13■□□□□ 0.33
NR1H2P55055 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NR1H2P55055 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NR1H2P55055 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NR1H2P55055 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NR1H2P55055 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NR1H2P55055 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms