Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC25.69■■□□□ 1.7
CLTCL1P53675 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLTCL1P53675 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLTCL1P53675 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.69■■□□□ 1.7
CLTCL1P53675 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLTCL1P53675 SIRPAP1-201ENST00000448467 1770 ntBASIC25.68■■□□□ 1.7
CLTCL1P53675 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.68■■□□□ 1.7
CLTCL1P53675 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CLTCL1P53675 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 AL096828.2-201ENST00000567259 1965 ntBASIC25.68■■□□□ 1.7
CLTCL1P53675 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25.68■■□□□ 1.7
CLTCL1P53675 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CLTCL1P53675 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CLTCL1P53675 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.68■■□□□ 1.7
CLTCL1P53675 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.68■■□□□ 1.7
CLTCL1P53675 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC25.68■■□□□ 1.7
CLTCL1P53675 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC25.68■■□□□ 1.7
CLTCL1P53675 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 AC073592.5-201ENST00000624854 528 ntBASIC25.68■■□□□ 1.7
CLTCL1P53675 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLTCL1P53675 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CLTCL1P53675 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CLTCL1P53675 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
CLTCL1P53675 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC25.67■■□□□ 1.7
CLTCL1P53675 AC108751.1-201ENST00000490852 363 ntBASIC25.67■■□□□ 1.7
CLTCL1P53675 DUTP2-201ENST00000519164 463 ntBASIC25.67■■□□□ 1.7
CLTCL1P53675 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC25.67■■□□□ 1.7
CLTCL1P53675 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC25.67■■□□□ 1.7
CLTCL1P53675 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 AC132938.5-201ENST00000624980 1813 ntBASIC25.67■■□□□ 1.7
CLTCL1P53675 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.67■■□□□ 1.7
CLTCL1P53675 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLTCL1P53675 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.67■■□□□ 1.7
CLTCL1P53675 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 RPSAP43-201ENST00000402237 625 ntBASIC25.66■■□□□ 1.7
CLTCL1P53675 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 CIPC-205ENST00000555437 566 ntTSL 3 BASIC25.66■■□□□ 1.7
CLTCL1P53675 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.66■■□□□ 1.7
CLTCL1P53675 AC006557.2-201ENST00000592985 1240 ntBASIC25.66■■□□□ 1.7
CLTCL1P53675 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CLTCL1P53675 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC25.66■■□□□ 1.7
CLTCL1P53675 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC25.66■■□□□ 1.7
CLTCL1P53675 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CLTCL1P53675 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC25.66■■□□□ 1.7
CLTCL1P53675 CAND2-206ENST00000626378 333 ntTSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLTCL1P53675 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
CLTCL1P53675 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLTCL1P53675 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLTCL1P53675 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
CLTCL1P53675 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLTCL1P53675 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLTCL1P53675 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.65■■□□□ 1.7
CLTCL1P53675 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLTCL1P53675 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
CLTCL1P53675 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.65■■□□□ 1.7
CLTCL1P53675 KRT18P3-201ENST00000451602 1288 ntBASIC25.65■■□□□ 1.7
CLTCL1P53675 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC25.65■■□□□ 1.7
CLTCL1P53675 AC040169.1-201ENST00000565382 521 ntBASIC25.65■■□□□ 1.7
CLTCL1P53675 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CLTCL1P53675 AC093677.2-201ENST00000600169 1863 ntBASIC25.65■■□□□ 1.7
CLTCL1P53675 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
CLTCL1P53675 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC25.65■■□□□ 1.7
CLTCL1P53675 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.64■■□□□ 1.7
CLTCL1P53675 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC25.64■■□□□ 1.7
CLTCL1P53675 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CLTCL1P53675 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CLTCL1P53675 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms