Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.84■□□□□ 0.77
ACLYP53396 AC122714.2-201ENST00000502787 707 ntBASIC19.84■□□□□ 0.77
ACLYP53396 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.84■□□□□ 0.77
ACLYP53396 AC005829.1-201ENST00000570002 483 ntBASIC19.84■□□□□ 0.77
ACLYP53396 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.84■□□□□ 0.77
ACLYP53396 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.84■□□□□ 0.77
ACLYP53396 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 SIGLEC16-201ENST00000599858 1437 ntBASIC19.84■□□□□ 0.77
ACLYP53396 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ACLYP53396 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ACLYP53396 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 AC010460.3-201ENST00000511359 1579 ntBASIC19.83■□□□□ 0.77
ACLYP53396 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACLYP53396 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACLYP53396 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACLYP53396 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.83■□□□□ 0.77
ACLYP53396 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ACLYP53396 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.83■□□□□ 0.77
ACLYP53396 SPDYE21P-201ENST00000413323 827 ntBASIC19.83■□□□□ 0.77
ACLYP53396 AC096633.1-201ENST00000422446 749 ntBASIC19.83■□□□□ 0.77
ACLYP53396 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.83■□□□□ 0.77
ACLYP53396 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.83■□□□□ 0.77
ACLYP53396 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.83■□□□□ 0.77
ACLYP53396 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACLYP53396 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.83■□□□□ 0.77
ACLYP53396 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.83■□□□□ 0.77
ACLYP53396 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.83■□□□□ 0.76
ACLYP53396 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.83■□□□□ 0.76
ACLYP53396 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACLYP53396 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACLYP53396 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.82■□□□□ 0.76
ACLYP53396 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACLYP53396 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.82■□□□□ 0.76
ACLYP53396 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACLYP53396 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.82■□□□□ 0.76
ACLYP53396 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.82■□□□□ 0.76
ACLYP53396 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.82■□□□□ 0.76
ACLYP53396 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ACLYP53396 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.82■□□□□ 0.76
ACLYP53396 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.82■□□□□ 0.76
ACLYP53396 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACLYP53396 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.82■□□□□ 0.76
ACLYP53396 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ACLYP53396 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ACLYP53396 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.81■□□□□ 0.76
ACLYP53396 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ACLYP53396 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ACLYP53396 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
ACLYP53396 YBX1P5-201ENST00000509441 847 ntBASIC19.81■□□□□ 0.76
ACLYP53396 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ACLYP53396 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.81■□□□□ 0.76
ACLYP53396 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACLYP53396 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ACLYP53396 METTL21AP1-201ENST00000438852 635 ntBASIC19.8■□□□□ 0.76
ACLYP53396 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.8■□□□□ 0.76
ACLYP53396 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.8■□□□□ 0.76
ACLYP53396 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACLYP53396 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ACLYP53396 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms