Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HMGA2P52926 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.49■□□□□ 0.23
HMGA2P52926 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 CD99P1-205ENST00000527459 561 ntBASIC16.49■□□□□ 0.23
HMGA2P52926 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGA2P52926 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGA2P52926 AC008687.5-201ENST00000593746 558 ntBASIC16.49■□□□□ 0.23
HMGA2P52926 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 AC113410.3-201ENST00000623366 203 ntBASIC16.49■□□□□ 0.23
HMGA2P52926 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 AC090340.1-201ENST00000620778 4980 ntBASIC16.49■□□□□ 0.23
HMGA2P52926 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HMGA2P52926 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGA2P52926 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGA2P52926 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGA2P52926 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGA2P52926 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HMGA2P52926 AC012618.2-201ENST00000428058 849 ntBASIC16.48■□□□□ 0.23
HMGA2P52926 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.48■□□□□ 0.23
HMGA2P52926 BX088651.1-201ENST00000540551 451 ntBASIC16.48■□□□□ 0.23
HMGA2P52926 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.48■□□□□ 0.23
HMGA2P52926 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGA2P52926 AC233702.5-201ENST00000584107 538 ntBASIC16.48■□□□□ 0.23
HMGA2P52926 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGA2P52926 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HMGA2P52926 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HMGA2P52926 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HMGA2P52926 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 AC011676.5-201ENST00000624864 2660 ntBASIC16.48■□□□□ 0.23
HMGA2P52926 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
HMGA2P52926 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGA2P52926 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMGA2P52926 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 LINC00167-201ENST00000530583 1419 ntBASIC16.47■□□□□ 0.23
HMGA2P52926 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMGA2P52926 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGA2P52926 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.47■□□□□ 0.23
HMGA2P52926 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGA2P52926 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGA2P52926 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
HMGA2P52926 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGA2P52926 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HMGA2P52926 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGA2P52926 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGA2P52926 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HMGA2P52926 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGA2P52926 HTR7P1-202ENST00000624664 4411 ntBASIC16.46■□□□□ 0.23
HMGA2P52926 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGA2P52926 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGA2P52926 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.46■□□□□ 0.23
HMGA2P52926 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HMGA2P52926 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms