Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 REXO1L9P-201ENST00000604264 2108 ntBASIC17.75■□□□□ 0.43
GTF2A1P52655 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.74■□□□□ 0.43
GTF2A1P52655 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.74■□□□□ 0.43
GTF2A1P52655 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
GTF2A1P52655 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GTF2A1P52655 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
GTF2A1P52655 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.74■□□□□ 0.43
GTF2A1P52655 NORAD-201ENST00000565493 5339 ntBASIC17.74■□□□□ 0.43
GTF2A1P52655 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GTF2A1P52655 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.73■□□□□ 0.43
GTF2A1P52655 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.73■□□□□ 0.43
GTF2A1P52655 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.73■□□□□ 0.43
GTF2A1P52655 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.73■□□□□ 0.43
GTF2A1P52655 AC091799.1-201ENST00000422823 811 ntBASIC17.73■□□□□ 0.43
GTF2A1P52655 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.73■□□□□ 0.43
GTF2A1P52655 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.73■□□□□ 0.43
GTF2A1P52655 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 AC110285.6-201ENST00000617652 491 ntBASIC17.73■□□□□ 0.43
GTF2A1P52655 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 AL358852.1-201ENST00000623174 1268 ntBASIC17.73■□□□□ 0.43
GTF2A1P52655 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.73■□□□□ 0.43
GTF2A1P52655 AC008406.3-201ENST00000620001 1374 ntBASIC17.73■□□□□ 0.43
GTF2A1P52655 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.73■□□□□ 0.43
GTF2A1P52655 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GTF2A1P52655 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.73■□□□□ 0.43
GTF2A1P52655 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.72■□□□□ 0.43
GTF2A1P52655 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms