Protein–RNA interactions for Protein: P35408

PTGER4, Prostaglandin E2 receptor EP4 subtype, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4P35408 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.35■□□□□ 0.21
PTGER4P35408 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTGER4P35408 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTGER4P35408 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PTGER4P35408 AL161938.1-201ENST00000569833 2180 ntBASIC16.35■□□□□ 0.21
PTGER4P35408 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PTGER4P35408 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTGER4P35408 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTGER4P35408 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTGER4P35408 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTGER4P35408 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.34■□□□□ 0.21
PTGER4P35408 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.34■□□□□ 0.21
PTGER4P35408 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PTGER4P35408 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 AC233702.3-201ENST00000578656 1387 ntBASIC16.34■□□□□ 0.21
PTGER4P35408 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTGER4P35408 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.33■□□□□ 0.21
PTGER4P35408 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.33■□□□□ 0.21
PTGER4P35408 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTGER4P35408 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.33■□□□□ 0.2
PTGER4P35408 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 MIR574-201ENST00000385209 96 ntBASIC16.33■□□□□ 0.2
PTGER4P35408 KRT16P4-201ENST00000453883 522 ntBASIC16.33■□□□□ 0.2
PTGER4P35408 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.33■□□□□ 0.2
PTGER4P35408 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PTGER4P35408 AC092183.1-201ENST00000469884 875 ntBASIC16.33■□□□□ 0.2
PTGER4P35408 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.33■□□□□ 0.2
PTGER4P35408 RN7SL606P-201ENST00000472779 293 ntBASIC16.33■□□□□ 0.2
PTGER4P35408 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.33■□□□□ 0.2
PTGER4P35408 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.33■□□□□ 0.2
PTGER4P35408 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.33■□□□□ 0.2
PTGER4P35408 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 AC124864.1-201ENST00000623408 392 ntBASIC16.33■□□□□ 0.2
PTGER4P35408 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.33■□□□□ 0.2
PTGER4P35408 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PTGER4P35408 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PTGER4P35408 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.33■□□□□ 0.2
PTGER4P35408 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTGER4P35408 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTGER4P35408 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTGER4P35408 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTGER4P35408 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
PTGER4P35408 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms