Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.31□□□□□ -0.28
CKS2P33552 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.31□□□□□ -0.28
CKS2P33552 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CKS2P33552 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CKS2P33552 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.31□□□□□ -0.28
CKS2P33552 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CKS2P33552 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 PHGDH-209ENST00000641074 1780 ntBASIC13.3□□□□□ -0.28
CKS2P33552 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.3□□□□□ -0.28
CKS2P33552 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CKS2P33552 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 HLA-A-209ENST00000638375 975 ntBASIC13.3□□□□□ -0.28
CKS2P33552 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 HTR7P1-201ENST00000538670 1336 ntBASIC13.3□□□□□ -0.28
CKS2P33552 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS2P33552 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CKS2P33552 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS2P33552 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.29□□□□□ -0.28
CKS2P33552 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.29□□□□□ -0.28
CKS2P33552 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CKS2P33552 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CKS2P33552 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 KRT8P41-201ENST00000533985 1514 ntBASIC13.29□□□□□ -0.28
CKS2P33552 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.29□□□□□ -0.28
CKS2P33552 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS2P33552 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CKS2P33552 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms