Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA3P32297 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 AL023284.2-201ENST00000405850 579 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 AC009947.2-201ENST00000444014 672 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 MCCD1P1-208ENST00000445732 328 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHRNA3P32297 AC022616.7-201ENST00000525383 220 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 LINC01238-205ENST00000567549 1107 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA3P32297 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.06■□□□□ 0.64
CHRNA3P32297 CR769767.2-201ENST00000622735 460 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 AL023973.1-201ENST00000624619 620 ntBASIC19.06■□□□□ 0.64
CHRNA3P32297 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CHRNA3P32297 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA3P32297 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.06■□□□□ 0.64
CHRNA3P32297 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA3P32297 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA3P32297 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA3P32297 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
CHRNA3P32297 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 PRORSD1P-202ENST00000563365 2154 ntBASIC19.05■□□□□ 0.64
CHRNA3P32297 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.05■□□□□ 0.64
CHRNA3P32297 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA3P32297 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHRNA3P32297 AC012317.2-201ENST00000623305 2251 ntBASIC19.05■□□□□ 0.64
CHRNA3P32297 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA3P32297 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA3P32297 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA3P32297 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
CHRNA3P32297 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA3P32297 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA3P32297 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA3P32297 AP000523.1-201ENST00000398242 1049 ntBASIC19.04■□□□□ 0.64
CHRNA3P32297 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.04■□□□□ 0.64
CHRNA3P32297 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA3P32297 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CHRNA3P32297 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.04■□□□□ 0.64
CHRNA3P32297 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA3P32297 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA3P32297 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA3P32297 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHRNA3P32297 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.03■□□□□ 0.64
CHRNA3P32297 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 FAM8A6P-201ENST00000407496 1135 ntBASIC19.03■□□□□ 0.64
CHRNA3P32297 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.03■□□□□ 0.64
CHRNA3P32297 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA3P32297 AL441883.1-201ENST00000566170 1045 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms