Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.63■□□□□ 0.25
ABCD3P28288 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.63■□□□□ 0.25
ABCD3P28288 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.63■□□□□ 0.25
ABCD3P28288 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
ABCD3P28288 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.63■□□□□ 0.25
ABCD3P28288 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ABCD3P28288 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.63■□□□□ 0.25
ABCD3P28288 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.63■□□□□ 0.25
ABCD3P28288 IGHV3-41-201ENST00000613121 348 ntBASIC16.63■□□□□ 0.25
ABCD3P28288 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ABCD3P28288 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ABCD3P28288 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 LTB4R2-202ENST00000528054 3092 ntBASIC16.62■□□□□ 0.25
ABCD3P28288 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.62■□□□□ 0.25
ABCD3P28288 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 AL592071.1-201ENST00000611956 408 ntBASIC16.62■□□□□ 0.25
ABCD3P28288 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 AC124864.1-201ENST00000623408 392 ntBASIC16.62■□□□□ 0.25
ABCD3P28288 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.62■□□□□ 0.25
ABCD3P28288 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ABCD3P28288 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ABCD3P28288 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ABCD3P28288 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.61■□□□□ 0.25
ABCD3P28288 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ABCD3P28288 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ABCD3P28288 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 ATP5G2P1-201ENST00000433580 426 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 AP002383.4-201ENST00000442518 975 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.61■□□□□ 0.25
ABCD3P28288 RN7SL606P-201ENST00000472779 293 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 DUTP2-201ENST00000519164 463 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 NPAP1P7-201ENST00000613027 823 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 KRT18P1-202ENST00000452408 1331 ntBASIC16.61■□□□□ 0.25
ABCD3P28288 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ABCD3P28288 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.61■□□□□ 0.25
ABCD3P28288 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.6■□□□□ 0.25
ABCD3P28288 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ABCD3P28288 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms