Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.77■□□□□ 0.44
VARSP26640 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.77■□□□□ 0.44
VARSP26640 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.77■□□□□ 0.44
VARSP26640 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARSP26640 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARSP26640 KRT8P7-201ENST00000533003 1432 ntBASIC17.77■□□□□ 0.44
VARSP26640 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.77■□□□□ 0.44
VARSP26640 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARSP26640 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.77■□□□□ 0.44
VARSP26640 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VARSP26640 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.77■□□□□ 0.44
VARSP26640 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VARSP26640 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VARSP26640 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VARSP26640 ESPNP-201ENST00000270691 2015 ntBASIC17.77■□□□□ 0.43
VARSP26640 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VARSP26640 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.77■□□□□ 0.43
VARSP26640 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VARSP26640 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.77■□□□□ 0.43
VARSP26640 AL163051.1-201ENST00000569214 1512 ntBASIC17.77■□□□□ 0.43
VARSP26640 AL391005.1-201ENST00000623953 2435 ntBASIC17.77■□□□□ 0.43
VARSP26640 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VARSP26640 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
VARSP26640 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VARSP26640 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 AC093677.2-201ENST00000600169 1863 ntBASIC17.76■□□□□ 0.43
VARSP26640 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 TSPY5P-201ENST00000426936 936 ntBASIC17.76■□□□□ 0.43
VARSP26640 HOMER2P1-201ENST00000455653 964 ntBASIC17.76■□□□□ 0.43
VARSP26640 COX11P1-201ENST00000489116 835 ntBASIC17.76■□□□□ 0.43
VARSP26640 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.76■□□□□ 0.43
VARSP26640 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.76■□□□□ 0.43
VARSP26640 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.76■□□□□ 0.43
VARSP26640 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.76■□□□□ 0.43
VARSP26640 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VARSP26640 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.76■□□□□ 0.43
VARSP26640 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VARSP26640 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VARSP26640 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VARSP26640 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VARSP26640 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 AC117947.1-201ENST00000427448 529 ntBASIC17.75■□□□□ 0.43
VARSP26640 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.75■□□□□ 0.43
VARSP26640 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.75■□□□□ 0.43
VARSP26640 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.75■□□□□ 0.43
VARSP26640 AC104390.1-201ENST00000555663 520 ntBASIC17.75■□□□□ 0.43
VARSP26640 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
VARSP26640 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.75■□□□□ 0.43
VARSP26640 AL138966.2-201ENST00000621997 464 ntBASIC17.75■□□□□ 0.43
VARSP26640 AC141257.4-201ENST00000634557 245 ntBASIC17.75■□□□□ 0.43
VARSP26640 AC136944.6-201ENST00000634818 245 ntBASIC17.75■□□□□ 0.43
VARSP26640 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARSP26640 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.75■□□□□ 0.43
VARSP26640 SDHAP2-201ENST00000455183 2001 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms