Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCKDHBP21953 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCKDHBP21953 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BCKDHBP21953 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
BCKDHBP21953 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.79■□□□□ 0.44
BCKDHBP21953 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.79■□□□□ 0.44
BCKDHBP21953 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
BCKDHBP21953 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BCKDHBP21953 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.79■□□□□ 0.44
BCKDHBP21953 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.79■□□□□ 0.44
BCKDHBP21953 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.79■□□□□ 0.44
BCKDHBP21953 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.79■□□□□ 0.44
BCKDHBP21953 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 AC064836.3-201ENST00000607928 673 ntBASIC17.79■□□□□ 0.44
BCKDHBP21953 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.79■□□□□ 0.44
BCKDHBP21953 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.79■□□□□ 0.44
BCKDHBP21953 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BCKDHBP21953 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.78■□□□□ 0.44
BCKDHBP21953 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
BCKDHBP21953 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.78■□□□□ 0.44
BCKDHBP21953 KRT18P27-201ENST00000427733 1299 ntBASIC17.78■□□□□ 0.44
BCKDHBP21953 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.78■□□□□ 0.44
BCKDHBP21953 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.78■□□□□ 0.44
BCKDHBP21953 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.78■□□□□ 0.44
BCKDHBP21953 AL022326.1-202ENST00000641533 845 ntBASIC17.78■□□□□ 0.44
BCKDHBP21953 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.78■□□□□ 0.44
BCKDHBP21953 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
BCKDHBP21953 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
BCKDHBP21953 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 AC022898.2-201ENST00000616822 1312 ntBASIC17.77■□□□□ 0.44
BCKDHBP21953 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.77■□□□□ 0.44
BCKDHBP21953 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.77■□□□□ 0.44
BCKDHBP21953 MIR1199-201ENST00000621445 119 ntBASIC17.77■□□□□ 0.44
BCKDHBP21953 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.77■□□□□ 0.44
BCKDHBP21953 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.77■□□□□ 0.44
BCKDHBP21953 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BCKDHBP21953 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BCKDHBP21953 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BCKDHBP21953 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BCKDHBP21953 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.77■□□□□ 0.43
BCKDHBP21953 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BCKDHBP21953 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BCKDHBP21953 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.76■□□□□ 0.43
BCKDHBP21953 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.76■□□□□ 0.43
BCKDHBP21953 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BCKDHBP21953 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BCKDHBP21953 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BCKDHBP21953 PMPCAP1-201ENST00000508114 1576 ntBASIC17.76■□□□□ 0.43
BCKDHBP21953 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BCKDHBP21953 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BCKDHBP21953 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BCKDHBP21953 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms