Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 AL136038.3-201ENST00000561909 1096 ntBASIC18.6■□□□□ 0.57
ERCC2P18074 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 AC005332.3-201ENST00000589904 676 ntBASIC18.6■□□□□ 0.57
ERCC2P18074 GPR32P1-201ENST00000601788 811 ntBASIC18.6■□□□□ 0.57
ERCC2P18074 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
ERCC2P18074 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC2P18074 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC2P18074 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ERCC2P18074 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC2P18074 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC2P18074 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.59■□□□□ 0.57
ERCC2P18074 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC2P18074 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
ERCC2P18074 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERCC2P18074 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
ERCC2P18074 AL353692.3-201ENST00000407031 1396 ntBASIC18.58■□□□□ 0.57
ERCC2P18074 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ERCC2P18074 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERCC2P18074 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ERCC2P18074 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.58■□□□□ 0.56
ERCC2P18074 AL390719.2-201ENST00000606993 987 ntBASIC18.58■□□□□ 0.56
ERCC2P18074 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.58■□□□□ 0.56
ERCC2P18074 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.58■□□□□ 0.56
ERCC2P18074 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ERCC2P18074 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ERCC2P18074 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.58■□□□□ 0.56
ERCC2P18074 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERCC2P18074 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ERCC2P18074 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.57■□□□□ 0.56
ERCC2P18074 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 AC068880.1-201ENST00000507289 2297 ntBASIC18.57■□□□□ 0.56
ERCC2P18074 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 Z83836.1-201ENST00000624605 1642 ntBASIC18.57■□□□□ 0.56
ERCC2P18074 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.57■□□□□ 0.56
ERCC2P18074 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC2P18074 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 SLC25A6P5-201ENST00000435663 894 ntBASIC18.57■□□□□ 0.56
ERCC2P18074 KRT18P65-201ENST00000439811 1286 ntBASIC18.57■□□□□ 0.56
ERCC2P18074 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC2P18074 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.57■□□□□ 0.56
ERCC2P18074 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC2P18074 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC2P18074 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC2P18074 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.57■□□□□ 0.56
ERCC2P18074 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
ERCC2P18074 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC2P18074 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms