Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 AL023803.3-201ENST00000615559 522 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 CR769767.2-201ENST00000622735 460 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 AC006116.8-202ENST00000587620 1550 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.87■□□□□ 0.13
UBCP0CG48 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.86■□□□□ 0.13
UBCP0CG48 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
UBCP0CG48 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
UBCP0CG48 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.86■□□□□ 0.13
UBCP0CG48 TSPY20P-201ENST00000450910 630 ntBASIC15.86■□□□□ 0.13
UBCP0CG48 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.86■□□□□ 0.13
UBCP0CG48 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.86■□□□□ 0.13
UBCP0CG48 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.86■□□□□ 0.13
UBCP0CG48 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.86■□□□□ 0.13
UBCP0CG48 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.86■□□□□ 0.13
UBCP0CG48 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBCP0CG48 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.86■□□□□ 0.13
UBCP0CG48 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.85■□□□□ 0.13
UBCP0CG48 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.85■□□□□ 0.13
UBCP0CG48 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
UBCP0CG48 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
UBCP0CG48 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.85■□□□□ 0.13
UBCP0CG48 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
UBCP0CG48 UNC93B2-201ENST00000285383 730 ntBASIC15.85■□□□□ 0.13
UBCP0CG48 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 GCSHP5-201ENST00000443090 522 ntBASIC15.85■□□□□ 0.13
UBCP0CG48 AL158047.1-201ENST00000445918 881 ntBASIC15.85■□□□□ 0.13
UBCP0CG48 AC098590.1-201ENST00000468126 897 ntBASIC15.85■□□□□ 0.13
UBCP0CG48 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 AC012317.2-201ENST00000623305 2251 ntBASIC15.85■□□□□ 0.13
UBCP0CG48 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.85■□□□□ 0.13
UBCP0CG48 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.85■□□□□ 0.13
UBCP0CG48 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBCP0CG48 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
UBCP0CG48 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.85■□□□□ 0.13
UBCP0CG48 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
UBCP0CG48 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.84■□□□□ 0.13
UBCP0CG48 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBCP0CG48 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
UBCP0CG48 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms