Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SP9P0CG40 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SP9P0CG40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SP9P0CG40 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.68■□□□□ 0.42
SP9P0CG40 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SP9P0CG40 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SP9P0CG40 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SP9P0CG40 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SP9P0CG40 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SP9P0CG40 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 PMS2P4-201ENST00000412466 1052 ntBASIC17.68■□□□□ 0.42
SP9P0CG40 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.68■□□□□ 0.42
SP9P0CG40 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.68■□□□□ 0.42
SP9P0CG40 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.68■□□□□ 0.42
SP9P0CG40 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.68■□□□□ 0.42
SP9P0CG40 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.68■□□□□ 0.42
SP9P0CG40 AC093520.2-201ENST00000561830 333 ntBASIC17.68■□□□□ 0.42
SP9P0CG40 AL390955.2-201ENST00000603032 514 ntBASIC17.68■□□□□ 0.42
SP9P0CG40 AC092902.6-201ENST00000641783 218 ntBASIC17.68■□□□□ 0.42
SP9P0CG40 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP9P0CG40 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SP9P0CG40 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.68■□□□□ 0.42
SP9P0CG40 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SP9P0CG40 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 AC023141.5-201ENST00000458585 616 ntBASIC17.67■□□□□ 0.42
SP9P0CG40 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 AC012645.4-201ENST00000610691 1061 ntBASIC17.67■□□□□ 0.42
SP9P0CG40 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.67■□□□□ 0.42
SP9P0CG40 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.67■□□□□ 0.42
SP9P0CG40 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.67■□□□□ 0.42
SP9P0CG40 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP9P0CG40 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.66■□□□□ 0.42
SP9P0CG40 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.66■□□□□ 0.42
SP9P0CG40 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.66■□□□□ 0.42
SP9P0CG40 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.66■□□□□ 0.42
SP9P0CG40 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.66■□□□□ 0.42
SP9P0CG40 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.66■□□□□ 0.42
SP9P0CG40 AC093214.1-201ENST00000511688 1107 ntBASIC17.66■□□□□ 0.42
SP9P0CG40 AC005225.4-201ENST00000557330 545 ntBASIC17.66■□□□□ 0.42
SP9P0CG40 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.66■□□□□ 0.42
SP9P0CG40 AC007064.4-201ENST00000637740 555 ntBASIC17.66■□□□□ 0.42
SP9P0CG40 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.66■□□□□ 0.42
SP9P0CG40 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SP9P0CG40 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SP9P0CG40 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.66■□□□□ 0.42
SP9P0CG40 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SP9P0CG40 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms