Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
HOXC6P09630 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HOXC6P09630 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC6P09630 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
HOXC6P09630 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.33■□□□□ 0.85
HOXC6P09630 HMGN1P19-201ENST00000436976 333 ntBASIC20.33■□□□□ 0.85
HOXC6P09630 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.33■□□□□ 0.85
HOXC6P09630 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC6P09630 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.33■□□□□ 0.85
HOXC6P09630 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.33■□□□□ 0.85
HOXC6P09630 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.33■□□□□ 0.85
HOXC6P09630 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.33■□□□□ 0.85
HOXC6P09630 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.33■□□□□ 0.85
HOXC6P09630 AL022326.1-202ENST00000641533 845 ntBASIC20.33■□□□□ 0.85
HOXC6P09630 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.33■□□□□ 0.84
HOXC6P09630 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.33■□□□□ 0.84
HOXC6P09630 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HOXC6P09630 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC6P09630 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
HOXC6P09630 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.32■□□□□ 0.84
HOXC6P09630 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.32■□□□□ 0.84
HOXC6P09630 PRYP5-201ENST00000451909 266 ntBASIC20.32■□□□□ 0.84
HOXC6P09630 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.32■□□□□ 0.84
HOXC6P09630 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.32■□□□□ 0.84
HOXC6P09630 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.32■□□□□ 0.84
HOXC6P09630 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC6P09630 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.32■□□□□ 0.84
HOXC6P09630 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.32■□□□□ 0.84
HOXC6P09630 AC002347.1-201ENST00000569543 541 ntBASIC20.32■□□□□ 0.84
HOXC6P09630 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.32■□□□□ 0.84
HOXC6P09630 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HOXC6P09630 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HOXC6P09630 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HOXC6P09630 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXC6P09630 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXC6P09630 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HOXC6P09630 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.31■□□□□ 0.84
HOXC6P09630 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.31■□□□□ 0.84
HOXC6P09630 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HOXC6P09630 AL355385.1-201ENST00000606123 409 ntBASIC20.31■□□□□ 0.84
HOXC6P09630 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HOXC6P09630 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HOXC6P09630 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXC6P09630 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC6P09630 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HOXC6P09630 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HOXC6P09630 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
HOXC6P09630 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 AC096633.1-201ENST00000422446 749 ntBASIC20.3■□□□□ 0.84
HOXC6P09630 AC122714.2-201ENST00000502787 707 ntBASIC20.3■□□□□ 0.84
HOXC6P09630 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXC6P09630 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
HOXC6P09630 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
HOXC6P09630 PGM5P2-202ENST00000637225 1043 ntBASIC20.3■□□□□ 0.84
HOXC6P09630 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HOXC6P09630 AC134684.3-201ENST00000641758 218 ntBASIC20.3■□□□□ 0.84
HOXC6P09630 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.3■□□□□ 0.84
HOXC6P09630 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HOXC6P09630 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.3■□□□□ 0.84
HOXC6P09630 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC6P09630 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HOXC6P09630 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms