Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PDHA1P08559 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 AC008894.3-201ENST00000624324 3103 ntBASIC18.6■□□□□ 0.57
PDHA1P08559 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 SPDYE15P-201ENST00000424157 909 ntBASIC18.6■□□□□ 0.57
PDHA1P08559 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.6■□□□□ 0.57
PDHA1P08559 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.6■□□□□ 0.57
PDHA1P08559 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.6■□□□□ 0.57
PDHA1P08559 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 MIR3917-201ENST00000580971 93 ntBASIC18.6■□□□□ 0.57
PDHA1P08559 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.6■□□□□ 0.57
PDHA1P08559 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.6■□□□□ 0.57
PDHA1P08559 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDHA1P08559 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDHA1P08559 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 AL359075.1-203ENST00000462729 1002 ntBASIC18.59■□□□□ 0.57
PDHA1P08559 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 AL049597.2-201ENST00000565575 961 ntBASIC18.59■□□□□ 0.57
PDHA1P08559 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.59■□□□□ 0.57
PDHA1P08559 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.59■□□□□ 0.57
PDHA1P08559 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDHA1P08559 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.59■□□□□ 0.57
PDHA1P08559 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.59■□□□□ 0.57
PDHA1P08559 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDHA1P08559 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDHA1P08559 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDHA1P08559 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDHA1P08559 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.58■□□□□ 0.57
PDHA1P08559 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDHA1P08559 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.58■□□□□ 0.57
PDHA1P08559 PKD1P1-201ENST00000458669 6805 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 AC124067.4-201ENST00000519691 2379 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 RASA4DP-201ENST00000460726 1199 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 AC022616.7-201ENST00000525383 220 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.58■□□□□ 0.56
PDHA1P08559 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PDHA1P08559 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 AC073592.3-201ENST00000625118 1834 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDHA1P08559 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PDHA1P08559 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.58■□□□□ 0.56
PDHA1P08559 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.58■□□□□ 0.56
PDHA1P08559 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.58■□□□□ 0.56
PDHA1P08559 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.58■□□□□ 0.56
PDHA1P08559 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.58■□□□□ 0.56
PDHA1P08559 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDHA1P08559 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms