Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.64■□□□□ 0.25
THBS1P07996 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.64■□□□□ 0.25
THBS1P07996 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.64■□□□□ 0.25
THBS1P07996 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.64■□□□□ 0.25
THBS1P07996 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.64■□□□□ 0.25
THBS1P07996 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
THBS1P07996 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THBS1P07996 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 LIN28AP1-201ENST00000429574 405 ntBASIC16.63■□□□□ 0.25
THBS1P07996 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.63■□□□□ 0.25
THBS1P07996 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.63■□□□□ 0.25
THBS1P07996 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
THBS1P07996 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 AC012317.2-201ENST00000623305 2251 ntBASIC16.63■□□□□ 0.25
THBS1P07996 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THBS1P07996 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
THBS1P07996 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.63■□□□□ 0.25
THBS1P07996 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
THBS1P07996 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.62■□□□□ 0.25
THBS1P07996 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.62■□□□□ 0.25
THBS1P07996 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
THBS1P07996 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.62■□□□□ 0.25
THBS1P07996 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
THBS1P07996 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
THBS1P07996 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THBS1P07996 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THBS1P07996 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
THBS1P07996 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THBS1P07996 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms