Protein–RNA interactions for Protein: P05783

KRT18, Keratin, type I cytoskeletal 18, humanhuman

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P05783 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT18P05783 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT18P05783 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.23■□□□□ 0.83
KRT18P05783 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT18P05783 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT18P05783 LINC01311-201ENST00000565162 1445 ntBASIC20.23■□□□□ 0.83
KRT18P05783 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT18P05783 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT18P05783 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT18P05783 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KRT18P05783 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT18P05783 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT18P05783 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
KRT18P05783 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT18P05783 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRT18P05783 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT18P05783 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT18P05783 ZNF444P1-201ENST00000559497 298 ntBASIC20.22■□□□□ 0.83
KRT18P05783 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT18P05783 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRT18P05783 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT18P05783 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT18P05783 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRT18P05783 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
KRT18P05783 HBZP1-201ENST00000354915 429 ntBASIC20.21■□□□□ 0.83
KRT18P05783 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 KRT18P48-201ENST00000434763 852 ntBASIC20.21■□□□□ 0.83
KRT18P05783 AL671277.2-201ENST00000458060 996 ntBASIC20.21■□□□□ 0.83
KRT18P05783 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
KRT18P05783 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KRT18P05783 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT18P05783 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT18P05783 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT18P05783 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KRT18P05783 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
KRT18P05783 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.2■□□□□ 0.83
KRT18P05783 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
KRT18P05783 HLA-F-220ENST00000434407 884 ntBASIC20.2■□□□□ 0.82
KRT18P05783 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT18P05783 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT18P05783 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.2■□□□□ 0.82
KRT18P05783 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT18P05783 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT18P05783 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT18P05783 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT18P05783 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT18P05783 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KRT18P05783 AC093010.1-201ENST00000473625 1624 ntBASIC20.2■□□□□ 0.82
KRT18P05783 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms