Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR3DP05423 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.58■■□□□ 1.04
POLR3DP05423 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
POLR3DP05423 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR3DP05423 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR3DP05423 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR3DP05423 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
POLR3DP05423 LINC00602-201ENST00000629776 2065 ntBASIC21.57■■□□□ 1.04
POLR3DP05423 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR3DP05423 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
POLR3DP05423 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR3DP05423 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.57■■□□□ 1.04
POLR3DP05423 AL845331.1-201ENST00000424978 1190 ntBASIC21.57■■□□□ 1.04
POLR3DP05423 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR3DP05423 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.57■■□□□ 1.04
POLR3DP05423 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
POLR3DP05423 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR3DP05423 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR3DP05423 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR3DP05423 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
POLR3DP05423 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
POLR3DP05423 NSUN5P1-202ENST00000421140 1535 ntBASIC21.56■■□□□ 1.04
POLR3DP05423 NSUN5P2-203ENST00000457352 1529 ntBASIC21.56■■□□□ 1.04
POLR3DP05423 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR3DP05423 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 AC246785.2-201ENST00000432512 513 ntBASIC21.56■■□□□ 1.04
POLR3DP05423 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.56■■□□□ 1.04
POLR3DP05423 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.56■■□□□ 1.04
POLR3DP05423 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
POLR3DP05423 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 IFNL4P1-201ENST00000607083 540 ntBASIC21.56■■□□□ 1.04
POLR3DP05423 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.56■■□□□ 1.04
POLR3DP05423 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.56■■□□□ 1.04
POLR3DP05423 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 GMCL1P1-201ENST00000463439 1581 ntBASIC21.56■■□□□ 1.04
POLR3DP05423 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR3DP05423 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR3DP05423 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
POLR3DP05423 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR3DP05423 MINOS1P3-201ENST00000457048 203 ntBASIC21.55■■□□□ 1.04
POLR3DP05423 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 KRT18P31-201ENST00000506277 1292 ntBASIC21.55■■□□□ 1.04
POLR3DP05423 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR3DP05423 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 AC135050.7-201ENST00000624508 2218 ntBASIC21.55■■□□□ 1.04
POLR3DP05423 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR3DP05423 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR3DP05423 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
POLR3DP05423 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
POLR3DP05423 AC026396.1-201ENST00000419388 421 ntBASIC21.54■■□□□ 1.04
POLR3DP05423 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
POLR3DP05423 AC068472.1-201ENST00000474589 881 ntBASIC21.54■■□□□ 1.04
POLR3DP05423 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR3DP05423 LINC01711-201ENST00000598340 967 ntBASIC21.54■■□□□ 1.04
POLR3DP05423 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.54■■□□□ 1.04
POLR3DP05423 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.54■■□□□ 1.04
POLR3DP05423 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
POLR3DP05423 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR3DP05423 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR3DP05423 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms