Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 KRT8P3-201ENST00000519669 1449 ntBASIC15.27■□□□□ 0.04
HLA-AP01891 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-AP01891 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-AP01891 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-AP01891 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
HLA-AP01891 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 UNC93B4-201ENST00000505679 747 ntBASIC15.27■□□□□ 0.04
HLA-AP01891 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
HLA-AP01891 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-AP01891 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-AP01891 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 NFIC-211ENST00000641145 8399 ntBASIC15.27■□□□□ 0.03
HLA-AP01891 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HLA-AP01891 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HLA-AP01891 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
HLA-AP01891 UBALD1-205ENST00000590891 2641 ntBASIC15.27■□□□□ 0.03
HLA-AP01891 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-AP01891 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HLA-AP01891 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
HLA-AP01891 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-AP01891 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-AP01891 AC046158.3-201ENST00000624947 2558 ntBASIC15.26■□□□□ 0.03
HLA-AP01891 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 MIR4651-201ENST00000582622 73 ntBASIC15.26■□□□□ 0.03
HLA-AP01891 AC008687.6-201ENST00000596318 630 ntBASIC15.26■□□□□ 0.03
HLA-AP01891 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
HLA-AP01891 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-AP01891 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-AP01891 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-AP01891 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HLA-AP01891 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-AP01891 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-AP01891 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-AP01891 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HLA-AP01891 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 HTR7P1-201ENST00000538670 1336 ntBASIC15.25■□□□□ 0.03
HLA-AP01891 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-AP01891 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-AP01891 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-AP01891 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
HLA-AP01891 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HLA-AP01891 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-AP01891 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-AP01891 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-AP01891 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-AP01891 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-AP01891 AC120498.8-201ENST00000614275 531 ntBASIC15.25■□□□□ 0.03
HLA-AP01891 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms