Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.91■□□□□ 0.78
CD4P01730 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 LINC00602-201ENST00000629776 2065 ntBASIC19.9■□□□□ 0.78
CD4P01730 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.9■□□□□ 0.78
CD4P01730 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.9■□□□□ 0.78
CD4P01730 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.9■□□□□ 0.78
CD4P01730 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.9■□□□□ 0.78
CD4P01730 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.9■□□□□ 0.78
CD4P01730 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.9■□□□□ 0.78
CD4P01730 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 UNC93B6-202ENST00000528242 690 ntBASIC19.9■□□□□ 0.78
CD4P01730 AC105339.3-201ENST00000560043 636 ntBASIC19.9■□□□□ 0.78
CD4P01730 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 MTDHP4-201ENST00000600287 670 ntBASIC19.9■□□□□ 0.78
CD4P01730 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.9■□□□□ 0.78
CD4P01730 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 MYLKP1-201ENST00000509077 1580 ntBASIC19.9■□□□□ 0.78
CD4P01730 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD4P01730 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.9■□□□□ 0.78
CD4P01730 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CD4P01730 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CD4P01730 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 AC120498.9-201ENST00000339021 3867 ntBASIC19.89■□□□□ 0.77
CD4P01730 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD4P01730 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.89■□□□□ 0.77
CD4P01730 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.89■□□□□ 0.77
CD4P01730 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.89■□□□□ 0.77
CD4P01730 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.89■□□□□ 0.77
CD4P01730 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.89■□□□□ 0.77
CD4P01730 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD4P01730 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.89■□□□□ 0.77
CD4P01730 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CD4P01730 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
CD4P01730 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.88■□□□□ 0.77
CD4P01730 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD4P01730 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 AP002414.3-201ENST00000589352 1468 ntBASIC19.88■□□□□ 0.77
CD4P01730 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.88■□□□□ 0.77
CD4P01730 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.88■□□□□ 0.77
CD4P01730 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 KRT18P65-201ENST00000439811 1286 ntBASIC19.88■□□□□ 0.77
CD4P01730 DNAJB3-201ENST00000446806 729 ntBASIC19.88■□□□□ 0.77
CD4P01730 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.88■□□□□ 0.77
CD4P01730 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CD4P01730 MIR3687-2-201ENST00000577708 61 ntBASIC19.88■□□□□ 0.77
CD4P01730 MIR3687-1-201ENST00000614492 61 ntBASIC19.88■□□□□ 0.77
CD4P01730 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.88■□□□□ 0.77
CD4P01730 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.88■□□□□ 0.77
CD4P01730 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CD4P01730 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD4P01730 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CD4P01730 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.87■□□□□ 0.77
CD4P01730 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CD4P01730 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CD4P01730 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.87■□□□□ 0.77
CD4P01730 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CD4P01730 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.87■□□□□ 0.77
CD4P01730 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD4P01730 AC004832.2-201ENST00000426397 482 ntBASIC19.87■□□□□ 0.77
CD4P01730 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.87■□□□□ 0.77
CD4P01730 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms