Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMP1P01033 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 COX20P2-201ENST00000452636 358 ntBASIC19.43■□□□□ 0.7
TIMP1P01033 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.43■□□□□ 0.7
TIMP1P01033 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMP1P01033 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.43■□□□□ 0.7
TIMP1P01033 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMP1P01033 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMP1P01033 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMP1P01033 AC093484.2-201ENST00000580996 2166 ntBASIC19.42■□□□□ 0.7
TIMP1P01033 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP1P01033 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP1P01033 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.42■□□□□ 0.7
TIMP1P01033 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP1P01033 RPS15P9-201ENST00000494093 319 ntBASIC19.42■□□□□ 0.7
TIMP1P01033 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMP1P01033 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMP1P01033 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TIMP1P01033 AC093028.1-201ENST00000622998 982 ntBASIC19.42■□□□□ 0.7
TIMP1P01033 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP1P01033 AL049812.1-201ENST00000432563 2267 ntBASIC19.41■□□□□ 0.7
TIMP1P01033 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TIMP1P01033 AC132938.6-201ENST00000623828 1655 ntBASIC19.41■□□□□ 0.7
TIMP1P01033 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 TSEN15P1-201ENST00000423257 515 ntBASIC19.41■□□□□ 0.7
TIMP1P01033 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.41■□□□□ 0.7
TIMP1P01033 AC244107.1-201ENST00000442033 332 ntBASIC19.41■□□□□ 0.7
TIMP1P01033 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP1P01033 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TIMP1P01033 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 NCF1C-201ENST00000438382 1427 ntBASIC19.41■□□□□ 0.7
TIMP1P01033 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMP1P01033 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP1P01033 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP1P01033 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP1P01033 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TIMP1P01033 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMP1P01033 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMP1P01033 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMP1P01033 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TIMP1P01033 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMP1P01033 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms