Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
MT-CO1P00395 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
MT-CO1P00395 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.5■□□□□ 0.55
MT-CO1P00395 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-CO1P00395 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.5■□□□□ 0.55
MT-CO1P00395 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.5■□□□□ 0.55
MT-CO1P00395 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 IGHV3-41-201ENST00000613121 348 ntBASIC18.5■□□□□ 0.55
MT-CO1P00395 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-CO1P00395 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
MT-CO1P00395 GMCL1P1-201ENST00000463439 1581 ntBASIC18.5■□□□□ 0.55
MT-CO1P00395 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO1P00395 AL390961.4-201ENST00000623958 2535 ntBASIC18.5■□□□□ 0.55
MT-CO1P00395 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO1P00395 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-CO1P00395 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-CO1P00395 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MT-CO1P00395 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-CO1P00395 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MT-CO1P00395 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.49■□□□□ 0.55
MT-CO1P00395 RN7SL606P-201ENST00000472779 293 ntBASIC18.49■□□□□ 0.55
MT-CO1P00395 AC113404.2-201ENST00000507884 177 ntBASIC18.49■□□□□ 0.55
MT-CO1P00395 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.49■□□□□ 0.55
MT-CO1P00395 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 TPSP2-201ENST00000561760 610 ntBASIC18.49■□□□□ 0.55
MT-CO1P00395 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MT-CO1P00395 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO1P00395 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MT-CO1P00395 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MT-CO1P00395 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 LINC00602-201ENST00000629776 2065 ntBASIC18.48■□□□□ 0.55
MT-CO1P00395 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-CO1P00395 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-CO1P00395 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MT-CO1P00395 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
MT-CO1P00395 AC090616.6-201ENST00000582640 721 ntBASIC18.48■□□□□ 0.55
MT-CO1P00395 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-CO1P00395 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO1P00395 AC124864.1-201ENST00000623408 392 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms