Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.08■□□□□ 0.33
CLPTM1O96005 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CLPTM1O96005 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CLPTM1O96005 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.08■□□□□ 0.33
CLPTM1O96005 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
CLPTM1O96005 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CLPTM1O96005 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.08■□□□□ 0.32
CLPTM1O96005 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.08■□□□□ 0.32
CLPTM1O96005 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.08■□□□□ 0.32
CLPTM1O96005 AC069544.1-201ENST00000609399 999 ntBASIC17.08■□□□□ 0.32
CLPTM1O96005 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.08■□□□□ 0.32
CLPTM1O96005 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLPTM1O96005 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.08■□□□□ 0.32
CLPTM1O96005 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 PCDHA1-201ENST00000378133 2726 ntBASIC17.07■□□□□ 0.32
CLPTM1O96005 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.07■□□□□ 0.32
CLPTM1O96005 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLPTM1O96005 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLPTM1O96005 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.07■□□□□ 0.32
CLPTM1O96005 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLPTM1O96005 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
CLPTM1O96005 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.07■□□□□ 0.32
CLPTM1O96005 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLPTM1O96005 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLPTM1O96005 AC105020.1-201ENST00000435356 2205 ntBASIC17.06■□□□□ 0.32
CLPTM1O96005 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLPTM1O96005 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.06■□□□□ 0.32
CLPTM1O96005 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 AC008741.2-201ENST00000612792 3115 ntBASIC17.06■□□□□ 0.32
CLPTM1O96005 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLPTM1O96005 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLPTM1O96005 FLJ38576-201ENST00000623820 2459 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms