Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MBD4O95243 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
MBD4O95243 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
MBD4O95243 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
MBD4O95243 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
MBD4O95243 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
MBD4O95243 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
MBD4O95243 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD4O95243 KRT8P47-201ENST00000604727 1398 ntBASIC21.51■■□□□ 1.03
MBD4O95243 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 KRT18P31-201ENST00000506277 1292 ntBASIC21.51■■□□□ 1.03
MBD4O95243 AC096582.2-201ENST00000510860 516 ntBASIC21.51■■□□□ 1.03
MBD4O95243 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD4O95243 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.51■■□□□ 1.03
MBD4O95243 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.51■■□□□ 1.03
MBD4O95243 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.51■■□□□ 1.03
MBD4O95243 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MBD4O95243 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MBD4O95243 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
MBD4O95243 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
MBD4O95243 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MBD4O95243 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MBD4O95243 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.5■■□□□ 1.03
MBD4O95243 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.5■■□□□ 1.03
MBD4O95243 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.5■■□□□ 1.03
MBD4O95243 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.5■■□□□ 1.03
MBD4O95243 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.5■■□□□ 1.03
MBD4O95243 AL138831.2-201ENST00000606564 490 ntBASIC21.5■■□□□ 1.03
MBD4O95243 IFNL4P1-201ENST00000607083 540 ntBASIC21.5■■□□□ 1.03
MBD4O95243 AL121772.3-201ENST00000610840 674 ntBASIC21.5■■□□□ 1.03
MBD4O95243 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MBD4O95243 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MBD4O95243 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MBD4O95243 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.5■■□□□ 1.03
MBD4O95243 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.49■■□□□ 1.03
MBD4O95243 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 AC125634.1-201ENST00000438758 1403 ntBASIC21.49■■□□□ 1.03
MBD4O95243 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MBD4O95243 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.49■■□□□ 1.03
MBD4O95243 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD4O95243 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD4O95243 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.49■■□□□ 1.03
MBD4O95243 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MBD4O95243 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.49■■□□□ 1.03
MBD4O95243 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MBD4O95243 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.49■■□□□ 1.03
MBD4O95243 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MBD4O95243 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 AC020763.4-201ENST00000623414 4170 ntBASIC21.49■■□□□ 1.03
MBD4O95243 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.49■■□□□ 1.03
MBD4O95243 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MBD4O95243 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.48■■□□□ 1.03
MBD4O95243 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 BICD1-207ENST00000551848 1962 ntBASIC21.48■■□□□ 1.03
MBD4O95243 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.48■■□□□ 1.03
MBD4O95243 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.48■■□□□ 1.03
MBD4O95243 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.48■■□□□ 1.03
MBD4O95243 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms