Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC099336.1-202ENST00000602961 463 ntBASIC18.94■□□□□ 0.62
BEST1O76090 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.94■□□□□ 0.62
BEST1O76090 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.94■□□□□ 0.62
BEST1O76090 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 AL354751.1-201ENST00000412768 1863 ntBASIC18.94■□□□□ 0.62
BEST1O76090 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST1O76090 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST1O76090 ABALON-201ENST00000629058 1903 ntBASIC18.94■□□□□ 0.62
BEST1O76090 KRT8P47-201ENST00000604727 1398 ntBASIC18.93■□□□□ 0.62
BEST1O76090 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST1O76090 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST1O76090 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
BEST1O76090 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BEST1O76090 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BEST1O76090 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BEST1O76090 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST1O76090 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.93■□□□□ 0.62
BEST1O76090 KRT126P-201ENST00000549467 1181 ntBASIC18.93■□□□□ 0.62
BEST1O76090 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.93■□□□□ 0.62
BEST1O76090 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 AC138894.3-201ENST00000603787 634 ntBASIC18.93■□□□□ 0.62
BEST1O76090 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BEST1O76090 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BEST1O76090 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BEST1O76090 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.92■□□□□ 0.62
BEST1O76090 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.92■□□□□ 0.62
BEST1O76090 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.92■□□□□ 0.62
BEST1O76090 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
BEST1O76090 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.92■□□□□ 0.62
BEST1O76090 VENTXP7-201ENST00000475503 772 ntBASIC18.92■□□□□ 0.62
BEST1O76090 UNC93B7-201ENST00000509439 705 ntBASIC18.92■□□□□ 0.62
BEST1O76090 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.92■□□□□ 0.62
BEST1O76090 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 BNIP3P18-201ENST00000593976 575 ntBASIC18.92■□□□□ 0.62
BEST1O76090 AL732292.2-201ENST00000609649 430 ntBASIC18.92■□□□□ 0.62
BEST1O76090 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BEST1O76090 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.92■□□□□ 0.62
BEST1O76090 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST1O76090 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST1O76090 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.91■□□□□ 0.62
BEST1O76090 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.91■□□□□ 0.62
BEST1O76090 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.91■□□□□ 0.62
BEST1O76090 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.91■□□□□ 0.62
BEST1O76090 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.91■□□□□ 0.62
BEST1O76090 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.91■□□□□ 0.62
BEST1O76090 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST1O76090 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms