Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT3O75175 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT3O75175 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
CNOT3O75175 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.54■□□□□ 0.4
CNOT3O75175 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT3O75175 AC124067.4-201ENST00000519691 2379 ntBASIC17.54■□□□□ 0.4
CNOT3O75175 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT3O75175 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT3O75175 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 Z98044.1-201ENST00000632503 1764 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CNOT3O75175 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CNOT3O75175 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 MIR564-202ENST00000385049 94 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 KRT18P23-201ENST00000435622 1283 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.53■□□□□ 0.4
CNOT3O75175 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.53■□□□□ 0.4
CNOT3O75175 MIR3917-201ENST00000580971 93 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 AC068587.9-201ENST00000641814 219 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT3O75175 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 AL031598.1-201ENST00000561511 1773 ntBASIC17.53■□□□□ 0.4
CNOT3O75175 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT3O75175 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT3O75175 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT3O75175 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.52■□□□□ 0.4
CNOT3O75175 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT3O75175 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT3O75175 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.52■□□□□ 0.4
CNOT3O75175 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT3O75175 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT3O75175 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.52■□□□□ 0.4
CNOT3O75175 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT3O75175 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT3O75175 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT3O75175 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CNOT3O75175 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT3O75175 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CNOT3O75175 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT3O75175 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT3O75175 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CNOT3O75175 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.52■□□□□ 0.39
CNOT3O75175 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT3O75175 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms