Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF11O60813 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF11O60813 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF11O60813 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 DRAXINP1-201ENST00000437611 948 ntBASIC18.31■□□□□ 0.52
PRAMEF11O60813 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 AP002414.4-201ENST00000589764 1148 ntBASIC18.31■□□□□ 0.52
PRAMEF11O60813 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF11O60813 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF11O60813 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 TPSP2-201ENST00000561760 610 ntBASIC18.3■□□□□ 0.52
PRAMEF11O60813 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF11O60813 NOC2LP1-202ENST00000452600 2235 ntBASIC18.3■□□□□ 0.52
PRAMEF11O60813 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF11O60813 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 KRT18P55-202ENST00000578578 1546 ntBASIC18.29■□□□□ 0.52
PRAMEF11O60813 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.29■□□□□ 0.52
PRAMEF11O60813 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 KRT8P47-201ENST00000604727 1398 ntBASIC18.29■□□□□ 0.52
PRAMEF11O60813 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF11O60813 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF11O60813 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF11O60813 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF11O60813 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF11O60813 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF11O60813 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEF11O60813 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF11O60813 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF11O60813 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms